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notebook describing issue using IPSL sample data with intake_esm in terms of time axis
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{
"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"Authors: A.Radhakrishnan, GFDL\n",
"Ack: Anderson Banihirwe for intake-esm updates, GFDL colleagues for data"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"esgf-world.json is the ESM collections spec file for the netCDF data in the S3 bucket esgf-world. \n",
"The catalog is updated on an on-demand basis for now. \n",
"You can refer to https://github.com/aradhakrishnanGFDL/gfdl-aws-analysis/tree/community/esm-collection-spec-examples for the most recent catalogs\n",
"More examples can be found in https://github.com/aradhakrishnanGFDL/gfdl-aws-analysis/tree/community/examples \n"
]
},
{
"cell_type": "code",
"execution_count": 6,
"metadata": {},
"outputs": [],
"source": [
"col_url = \"https://cmip6-nc.s3.us-east-2.amazonaws.com/esgf-world.json\" "
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"from glob import glob\n",
"import xarray as xr\n",
"import cftime\n",
"import numpy as np\n",
"import matplotlib.pyplot as plt\n",
"import intake, intake_esm\n",
"import pandas as pd\n",
"pd.set_option(\"display.max_colwidth\", None)\n",
"#!pip install cmip6_preprocessing\n",
"\n",
"%pip install git+https://github.com/jbusecke/cmip6_preprocessing.git\n",
"\n",
"\n",
"from cmip6_preprocessing.preprocessing import combined_preprocessing\n",
"from cmip6_preprocessing.preprocessing import (correct_units,rename_cmip6)"
]
},
{
"cell_type": "code",
"execution_count": 8,
"metadata": {},
"outputs": [],
"source": [
"col = intake.open_esm_datastore(col_url)\n",
"esmcol_data = col.esmcol_data"
]
},
{
"cell_type": "code",
"execution_count": 9,
"metadata": {},
"outputs": [],
"source": [
"def latest_version(cat):\n",
" \"\"\"\n",
" input\n",
" cat: esmdatastore\n",
" output\n",
" esmdatastore with latest DRS versions\n",
" \"\"\"\n",
" latest_cat = cat.df.sort_values(by=['version','path']).drop_duplicates(['temporal subset','model','mip_table',\n",
" 'institute','variable','ensemble_member',\n",
" 'grid_label','experiment_id'],keep='last')\n",
" return latest_cat"
]
},
{
"cell_type": "code",
"execution_count": 10,
"metadata": {},
"outputs": [],
"source": [
"query_Omon_zos = dict(experiment_id=['abrupt-4xCO2'],#,'historical'],\n",
" mip_table=['Omon'],\n",
" ensemble_member=[\"r1i1p1f1\"],\n",
" model=['IPSL-CM6A-LR'],#,'GFDL-ESM4'],\n",
" grid_label=['gn'],\n",
" variable=[\"zos\"])\n",
"\n",
"cat_Omon_zos = col.search(**query_Omon_zos)\n",
"cat_Omon_zos_lat = latest_version(cat_Omon_zos)\n",
"\n",
"\n",
"cat_Omon_zos_latest = intake.open_esm_datastore(cat_Omon_zos_lat,esmcol_data=esmcol_data)"
]
},
{
"cell_type": "code",
"execution_count": 11,
"metadata": {},
"outputs": [
{
"data": {
"text/html": [
"<div>\n",
"<style scoped>\n",
" .dataframe tbody tr th:only-of-type {\n",
" vertical-align: middle;\n",
" }\n",
"\n",
" .dataframe tbody tr th {\n",
" vertical-align: top;\n",
" }\n",
"\n",
" .dataframe thead th {\n",
" text-align: right;\n",
" }\n",
"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>project</th>\n",
" <th>institute</th>\n",
" <th>model</th>\n",
" <th>experiment_id</th>\n",
" <th>frequency</th>\n",
" <th>modeling_realm</th>\n",
" <th>mip_table</th>\n",
" <th>ensemble_member</th>\n",
" <th>grid_label</th>\n",
" <th>variable</th>\n",
" <th>temporal subset</th>\n",
" <th>version</th>\n",
" <th>path</th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
" <th>3</th>\n",
" <td>CMIP6</td>\n",
" <td>IPSL</td>\n",
" <td>IPSL-CM6A-LR</td>\n",
" <td>abrupt-4xCO2</td>\n",
" <td>mon</td>\n",
" <td>ocean</td>\n",
" <td>Omon</td>\n",
" <td>r1i1p1f1</td>\n",
" <td>gn</td>\n",
" <td>zos</td>\n",
" <td>185001-214912</td>\n",
" <td>v20190118</td>\n",
" <td>s3://esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_185001-214912.nc</td>\n",
" </tr>\n",
" <tr>\n",
" <th>4</th>\n",
" <td>CMIP6</td>\n",
" <td>IPSL</td>\n",
" <td>IPSL-CM6A-LR</td>\n",
" <td>abrupt-4xCO2</td>\n",
" <td>mon</td>\n",
" <td>ocean</td>\n",
" <td>Omon</td>\n",
" <td>r1i1p1f1</td>\n",
" <td>gn</td>\n",
" <td>zos</td>\n",
" <td>215001-244912</td>\n",
" <td>v20190118</td>\n",
" <td>s3://esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_215001-244912.nc</td>\n",
" </tr>\n",
" <tr>\n",
" <th>5</th>\n",
" <td>CMIP6</td>\n",
" <td>IPSL</td>\n",
" <td>IPSL-CM6A-LR</td>\n",
" <td>abrupt-4xCO2</td>\n",
" <td>mon</td>\n",
" <td>ocean</td>\n",
" <td>Omon</td>\n",
" <td>r1i1p1f1</td>\n",
" <td>gn</td>\n",
" <td>zos</td>\n",
" <td>245001-274912</td>\n",
" <td>v20190118</td>\n",
" <td>s3://esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_245001-274912.nc</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" project institute model experiment_id frequency modeling_realm \\\n",
"3 CMIP6 IPSL IPSL-CM6A-LR abrupt-4xCO2 mon ocean \n",
"4 CMIP6 IPSL IPSL-CM6A-LR abrupt-4xCO2 mon ocean \n",
"5 CMIP6 IPSL IPSL-CM6A-LR abrupt-4xCO2 mon ocean \n",
"\n",
" mip_table ensemble_member grid_label variable temporal subset version \\\n",
"3 Omon r1i1p1f1 gn zos 185001-214912 v20190118 \n",
"4 Omon r1i1p1f1 gn zos 215001-244912 v20190118 \n",
"5 Omon r1i1p1f1 gn zos 245001-274912 v20190118 \n",
"\n",
" path \n",
"3 s3://esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_185001-214912.nc \n",
"4 s3://esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_215001-244912.nc \n",
"5 s3://esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_245001-274912.nc "
]
},
"execution_count": 11,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"cat_Omon_zos_latest.df"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": []
},
{
"cell_type": "code",
"execution_count": 85,
"metadata": {},
"outputs": [],
"source": [
"# Pass this function for preprocessing zos data if needed\n",
"def pp_zos(ds):\n",
" ds = rename_cmip6(ds)\n",
" # ds = fix_time(ds)\n",
" ds = correct_units(ds)\n",
" return ds"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"TEST 1 - fails on ds_zos_ipsl_abrupt.sel(time=slice(\"2150\",\"2151\"))"
]
},
{
"cell_type": "code",
"execution_count": 12,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"\n",
"--> The keys in the returned dictionary of datasets are constructed as follows:\n",
"\t'project.institute.model.experiment_id.mip_table'\n"
]
},
{
"data": {
"text/html": [
"\n",
" <div>\n",
" <style>\n",
" /* Turns off some styling */\n",
" progress {\n",
" /* gets rid of default border in Firefox and Opera. */\n",
" border: none;\n",
" /* Needs to be in here for Safari polyfill so background images work as expected. */\n",
" background-size: auto;\n",
" }\n",
" .progress-bar-interrupted, .progress-bar-interrupted::-webkit-progress-bar {\n",
" background: #F44336;\n",
" }\n",
" </style>\n",
" <progress value='1' class='' max='1' style='width:300px; height:20px; vertical-align: middle;'></progress>\n",
" 100.00% [1/1 00:00<00:00]\n",
" </div>\n",
" "
],
"text/plain": [
"<IPython.core.display.HTML object>"
]
},
"metadata": {},
"output_type": "display_data"
}
],
"source": [
"dset_dict_zos = cat_Omon_zos_latest.to_dataset_dict(cdf_kwargs={'decode_times': False,'chunks': {'time': 1}}, storage_options={'anon':True},\n",
" )\n"
]
},
{
"cell_type": "code",
"execution_count": 13,
"metadata": {},
"outputs": [],
"source": [
"ds_zos_ipsl_abrupt = dset_dict_zos[\"CMIP6.IPSL.IPSL-CM6A-LR.abrupt-4xCO2.Omon\"]\n"
]
},
{
"cell_type": "code",
"execution_count": 23,
"metadata": {},
"outputs": [
{
"ename": "KeyError",
"evalue": "'2150'",
"output_type": "error",
"traceback": [
"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
"\u001b[0;31mTypeError\u001b[0m Traceback (most recent call last)",
"\u001b[0;32mpandas/_libs/index_class_helper.pxi\u001b[0m in \u001b[0;36mpandas._libs.index.Float64Engine._maybe_get_bool_indexer\u001b[0;34m()\u001b[0m\n",
"\u001b[0;32mpandas/_libs/index_class_helper.pxi\u001b[0m in \u001b[0;36mpandas._libs.index.Float64Engine._maybe_get_bool_indexer\u001b[0;34m()\u001b[0m\n",
"\u001b[0;31mTypeError\u001b[0m: Cannot convert bool to numpy.ndarray",
"\nDuring handling of the above exception, another exception occurred:\n",
"\u001b[0;31mKeyError\u001b[0m Traceback (most recent call last)",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mget_loc\u001b[0;34m(self, key, method, tolerance)\u001b[0m\n\u001b[1;32m 2894\u001b[0m \u001b[0;32mtry\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 2895\u001b[0;31m \u001b[0;32mreturn\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_engine\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mget_loc\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mcasted_key\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 2896\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mKeyError\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32mpandas/_libs/index.pyx\u001b[0m in \u001b[0;36mpandas._libs.index.IndexEngine.get_loc\u001b[0;34m()\u001b[0m\n",
"\u001b[0;32mpandas/_libs/index.pyx\u001b[0m in \u001b[0;36mpandas._libs.index.IndexEngine.get_loc\u001b[0;34m()\u001b[0m\n",
"\u001b[0;32mpandas/_libs/index.pyx\u001b[0m in \u001b[0;36mpandas._libs.index.IndexEngine._get_loc_duplicates\u001b[0;34m()\u001b[0m\n",
"\u001b[0;32mpandas/_libs/index_class_helper.pxi\u001b[0m in \u001b[0;36mpandas._libs.index.Float64Engine._maybe_get_bool_indexer\u001b[0;34m()\u001b[0m\n",
"\u001b[0;31mKeyError\u001b[0m: '2150'",
"\nThe above exception was the direct cause of the following exception:\n",
"\u001b[0;31mKeyError\u001b[0m Traceback (most recent call last)",
"\u001b[0;32m<ipython-input-23-5a8cefe398c3>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0mds_zos_ipsl_abrupt\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0msel\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mtime\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mslice\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m\"2150\"\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\"2151\"\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/core/dataset.py\u001b[0m in \u001b[0;36msel\u001b[0;34m(self, indexers, method, tolerance, drop, **indexers_kwargs)\u001b[0m\n\u001b[1;32m 2103\u001b[0m \"\"\"\n\u001b[1;32m 2104\u001b[0m \u001b[0mindexers\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0meither_dict_or_kwargs\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mindexers\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mindexers_kwargs\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m\"sel\"\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 2105\u001b[0;31m pos_indexers, new_indexes = remap_label_indexers(\n\u001b[0m\u001b[1;32m 2106\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mindexers\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mindexers\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mmethod\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mmethod\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mtolerance\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mtolerance\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 2107\u001b[0m )\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/core/coordinates.py\u001b[0m in \u001b[0;36mremap_label_indexers\u001b[0;34m(obj, indexers, method, tolerance, **indexers_kwargs)\u001b[0m\n\u001b[1;32m 395\u001b[0m }\n\u001b[1;32m 396\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 397\u001b[0;31m pos_indexers, new_indexes = indexing.remap_label_indexers(\n\u001b[0m\u001b[1;32m 398\u001b[0m \u001b[0mobj\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mv_indexers\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mmethod\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mmethod\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mtolerance\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mtolerance\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 399\u001b[0m )\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/core/indexing.py\u001b[0m in \u001b[0;36mremap_label_indexers\u001b[0;34m(data_obj, indexers, method, tolerance)\u001b[0m\n\u001b[1;32m 273\u001b[0m \u001b[0mcoords_dtype\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mdata_obj\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mcoords\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0mdim\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mdtype\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 274\u001b[0m \u001b[0mlabel\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mmaybe_cast_to_coords_dtype\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mcoords_dtype\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 275\u001b[0;31m \u001b[0midxr\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mnew_idx\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mconvert_label_indexer\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mindex\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mlabel\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mdim\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mmethod\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mtolerance\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 276\u001b[0m \u001b[0mpos_indexers\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0mdim\u001b[0m\u001b[0;34m]\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0midxr\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 277\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mnew_idx\u001b[0m \u001b[0;32mis\u001b[0m \u001b[0;32mnot\u001b[0m \u001b[0;32mNone\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/core/indexing.py\u001b[0m in \u001b[0;36mconvert_label_indexer\u001b[0;34m(index, label, index_name, method, tolerance)\u001b[0m\n\u001b[1;32m 124\u001b[0m \u001b[0;34m\"cannot use ``method`` argument if any indexers are \"\u001b[0m \u001b[0;34m\"slice objects\"\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 125\u001b[0m )\n\u001b[0;32m--> 126\u001b[0;31m indexer = index.slice_indexer(\n\u001b[0m\u001b[1;32m 127\u001b[0m \u001b[0m_sanitize_slice_element\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mstart\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 128\u001b[0m \u001b[0m_sanitize_slice_element\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mstop\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mslice_indexer\u001b[0;34m(self, start, end, step, kind)\u001b[0m\n\u001b[1;32m 4964\u001b[0m \u001b[0mslice\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;36m1\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;36m3\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;32mNone\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 4965\u001b[0m \"\"\"\n\u001b[0;32m-> 4966\u001b[0;31m \u001b[0mstart_slice\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mend_slice\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mslice_locs\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mstart\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mend\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mstep\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mstep\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mkind\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mkind\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 4967\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 4968\u001b[0m \u001b[0;31m# return a slice\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mslice_locs\u001b[0;34m(self, start, end, step, kind)\u001b[0m\n\u001b[1;32m 5167\u001b[0m \u001b[0mstart_slice\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;32mNone\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5168\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mstart\u001b[0m \u001b[0;32mis\u001b[0m \u001b[0;32mnot\u001b[0m \u001b[0;32mNone\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 5169\u001b[0;31m \u001b[0mstart_slice\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mget_slice_bound\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mstart\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m\"left\"\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mkind\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 5170\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mstart_slice\u001b[0m \u001b[0;32mis\u001b[0m \u001b[0;32mNone\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5171\u001b[0m \u001b[0mstart_slice\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;36m0\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mget_slice_bound\u001b[0;34m(self, label, side, kind)\u001b[0m\n\u001b[1;32m 5087\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mValueError\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5088\u001b[0m \u001b[0;31m# raise the original KeyError\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 5089\u001b[0;31m \u001b[0;32mraise\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 5090\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5091\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0misinstance\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mslc\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mnp\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mndarray\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mget_slice_bound\u001b[0;34m(self, label, side, kind)\u001b[0m\n\u001b[1;32m 5081\u001b[0m \u001b[0;31m# we need to look up the label\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5082\u001b[0m \u001b[0;32mtry\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 5083\u001b[0;31m \u001b[0mslc\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mget_loc\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 5084\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mKeyError\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5085\u001b[0m \u001b[0;32mtry\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/numeric.py\u001b[0m in \u001b[0;36mget_loc\u001b[0;34m(self, key, method, tolerance)\u001b[0m\n\u001b[1;32m 422\u001b[0m \u001b[0;32mreturn\u001b[0m \u001b[0mnan_idxs\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 423\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 424\u001b[0;31m \u001b[0;32mreturn\u001b[0m \u001b[0msuper\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mget_loc\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mkey\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mmethod\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mmethod\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mtolerance\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mtolerance\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 425\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 426\u001b[0m \u001b[0;34m@\u001b[0m\u001b[0mcache_readonly\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mget_loc\u001b[0;34m(self, key, method, tolerance)\u001b[0m\n\u001b[1;32m 2895\u001b[0m \u001b[0;32mreturn\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_engine\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mget_loc\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mcasted_key\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 2896\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mKeyError\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 2897\u001b[0;31m \u001b[0;32mraise\u001b[0m \u001b[0mKeyError\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mkey\u001b[0m\u001b[0;34m)\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 2898\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 2899\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mtolerance\u001b[0m \u001b[0;32mis\u001b[0m \u001b[0;32mnot\u001b[0m \u001b[0;32mNone\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;31mKeyError\u001b[0m: '2150'"
]
}
],
"source": [
"ds_zos_ipsl_abrupt.sel(time=slice(\"2150\",\"2151\"))"
]
},
{
"cell_type": "code",
"execution_count": 72,
"metadata": {},
"outputs": [
{
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"</style><pre class='xr-text-repr-fallback'>&lt;xarray.DataArray &#x27;time&#x27; (time: 10800)&gt;\n",
"array([1.550000e+01, 4.500000e+01, 7.450000e+01, ..., 1.094955e+05,\n",
" 1.095260e+05, 1.095565e+05])\n",
"Coordinates:\n",
" * time (time) float64 15.5 45.0 74.5 ... 1.095e+05 1.095e+05 1.096e+05\n",
"Attributes:\n",
" axis: T\n",
" standard_name: time\n",
" long_name: Time axis\n",
" calendar: gregorian\n",
" bounds: time_bounds</pre><div class='xr-wrap' hidden><div class='xr-header'><div class='xr-obj-type'>xarray.DataArray</div><div class='xr-array-name'>'time'</div><ul class='xr-dim-list'><li><span class='xr-has-index'>time</span>: 10800</li></ul></div><ul class='xr-sections'><li class='xr-section-item'><div class='xr-array-wrap'><input id='section-d0233263-6be8-4f01-b287-e08b41772edc' class='xr-array-in' type='checkbox' checked><label for='section-d0233263-6be8-4f01-b287-e08b41772edc' title='Show/hide data repr'><svg class='icon xr-icon-database'><use xlink:href='#icon-database'></use></svg></label><div class='xr-array-preview xr-preview'><span>15.5 45.0 74.5 105.0 135.5 ... 1.095e+05 1.095e+05 1.095e+05 1.096e+05</span></div><div class='xr-array-data'><pre>array([1.550000e+01, 4.500000e+01, 7.450000e+01, ..., 1.094955e+05,\n",
" 1.095260e+05, 1.095565e+05])</pre></div></div></li><li class='xr-section-item'><input id='section-64092cb8-0a00-4c66-adb7-d195f3e30d23' class='xr-section-summary-in' type='checkbox' checked><label for='section-64092cb8-0a00-4c66-adb7-d195f3e30d23' class='xr-section-summary' >Coordinates: <span>(1)</span></label><div class='xr-section-inline-details'></div><div class='xr-section-details'><ul class='xr-var-list'><li class='xr-var-item'><div class='xr-var-name'><span class='xr-has-index'>time</span></div><div class='xr-var-dims'>(time)</div><div class='xr-var-dtype'>float64</div><div class='xr-var-preview xr-preview'>15.5 45.0 ... 1.095e+05 1.096e+05</div><input id='attrs-f348d59a-28bd-462c-bfd6-2cfe3845bb27' class='xr-var-attrs-in' type='checkbox' ><label for='attrs-f348d59a-28bd-462c-bfd6-2cfe3845bb27' title='Show/Hide attributes'><svg class='icon xr-icon-file-text2'><use xlink:href='#icon-file-text2'></use></svg></label><input id='data-2593125a-7e79-4988-926f-320f28c3eaca' class='xr-var-data-in' type='checkbox'><label for='data-2593125a-7e79-4988-926f-320f28c3eaca' title='Show/Hide data repr'><svg class='icon xr-icon-database'><use xlink:href='#icon-database'></use></svg></label><div class='xr-var-attrs'><dl class='xr-attrs'><dt><span>axis :</span></dt><dd>T</dd><dt><span>standard_name :</span></dt><dd>time</dd><dt><span>long_name :</span></dt><dd>Time axis</dd><dt><span>calendar :</span></dt><dd>gregorian</dd><dt><span>bounds :</span></dt><dd>time_bounds</dd></dl></div><div class='xr-var-data'><pre>array([1.550000e+01, 4.500000e+01, 7.450000e+01, ..., 1.094955e+05,\n",
" 1.095260e+05, 1.095565e+05])</pre></div></li></ul></div></li><li class='xr-section-item'><input id='section-f5eab5d7-7058-4256-ac13-f1002b7b8452' class='xr-section-summary-in' type='checkbox' checked><label for='section-f5eab5d7-7058-4256-ac13-f1002b7b8452' class='xr-section-summary' >Attributes: <span>(5)</span></label><div class='xr-section-inline-details'></div><div class='xr-section-details'><dl class='xr-attrs'><dt><span>axis :</span></dt><dd>T</dd><dt><span>standard_name :</span></dt><dd>time</dd><dt><span>long_name :</span></dt><dd>Time axis</dd><dt><span>calendar :</span></dt><dd>gregorian</dd><dt><span>bounds :</span></dt><dd>time_bounds</dd></dl></div></li></ul></div></div>"
],
"text/plain": [
"<xarray.DataArray 'time' (time: 10800)>\n",
"array([1.550000e+01, 4.500000e+01, 7.450000e+01, ..., 1.094955e+05,\n",
" 1.095260e+05, 1.095565e+05])\n",
"Coordinates:\n",
" * time (time) float64 15.5 45.0 74.5 ... 1.095e+05 1.095e+05 1.096e+05\n",
"Attributes:\n",
" axis: T\n",
" standard_name: time\n",
" long_name: Time axis\n",
" calendar: gregorian\n",
" bounds: time_bounds"
]
},
"execution_count": 72,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"ds_zos_ipsl_abrupt['time']"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"TEST 2 - turn on decodes_times and then see the time units \n",
"also fails on ds_zos_ipsl_abrupt_t.sel(time=slice(\"2150\",\"2151\"))"
]
},
{
"cell_type": "code",
"execution_count": 20,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"\n",
"--> The keys in the returned dictionary of datasets are constructed as follows:\n",
"\t'project.institute.model.experiment_id.mip_table'\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/coding/times.py:427: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" dtype = _decode_cf_datetime_dtype(data, units, calendar, self.use_cftime)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/numpy/core/_asarray.py:83: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" return array(a, dtype, copy=False, order=order)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/coding/times.py:427: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" dtype = _decode_cf_datetime_dtype(data, units, calendar, self.use_cftime)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/coding/times.py:427: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" dtype = _decode_cf_datetime_dtype(data, units, calendar, self.use_cftime)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/numpy/core/_asarray.py:83: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" return array(a, dtype, copy=False, order=order)\n"
]
},
{
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"source": [
"dset_dict_zos = cat_Omon_zos_latest.to_dataset_dict(cdf_kwargs={'decode_times': True,'chunks': {'time': 1}}, storage_options={'anon':True},\n",
" )\n"
]
},
{
"cell_type": "code",
"execution_count": 24,
"metadata": {},
"outputs": [],
"source": [
"ds_zos_ipsl_abrupt_t = dset_dict_zos[\"CMIP6.IPSL.IPSL-CM6A-LR.abrupt-4xCO2.Omon\"]\n"
]
},
{
"cell_type": "code",
"execution_count": 25,
"metadata": {},
"outputs": [
{
"ename": "TypeError",
"evalue": "'<' not supported between instances of 'cftime._cftime.DatetimeGregorian' and 'str'",
"output_type": "error",
"traceback": [
"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
"\u001b[0;31mKeyError\u001b[0m Traceback (most recent call last)",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mget_loc\u001b[0;34m(self, key, method, tolerance)\u001b[0m\n\u001b[1;32m 2894\u001b[0m \u001b[0;32mtry\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 2895\u001b[0;31m \u001b[0;32mreturn\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_engine\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mget_loc\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mcasted_key\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 2896\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mKeyError\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32mpandas/_libs/index.pyx\u001b[0m in \u001b[0;36mpandas._libs.index.IndexEngine.get_loc\u001b[0;34m()\u001b[0m\n",
"\u001b[0;32mpandas/_libs/index.pyx\u001b[0m in \u001b[0;36mpandas._libs.index.IndexEngine.get_loc\u001b[0;34m()\u001b[0m\n",
"\u001b[0;32mpandas/_libs/hashtable_class_helper.pxi\u001b[0m in \u001b[0;36mpandas._libs.hashtable.PyObjectHashTable.get_item\u001b[0;34m()\u001b[0m\n",
"\u001b[0;32mpandas/_libs/hashtable_class_helper.pxi\u001b[0m in \u001b[0;36mpandas._libs.hashtable.PyObjectHashTable.get_item\u001b[0;34m()\u001b[0m\n",
"\u001b[0;31mKeyError\u001b[0m: '2150'",
"\nThe above exception was the direct cause of the following exception:\n",
"\u001b[0;31mKeyError\u001b[0m Traceback (most recent call last)",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mget_slice_bound\u001b[0;34m(self, label, side, kind)\u001b[0m\n\u001b[1;32m 5082\u001b[0m \u001b[0;32mtry\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 5083\u001b[0;31m \u001b[0mslc\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mget_loc\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 5084\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mKeyError\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mget_loc\u001b[0;34m(self, key, method, tolerance)\u001b[0m\n\u001b[1;32m 2896\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mKeyError\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 2897\u001b[0;31m \u001b[0;32mraise\u001b[0m \u001b[0mKeyError\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mkey\u001b[0m\u001b[0;34m)\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 2898\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;31mKeyError\u001b[0m: '2150'",
"\nDuring handling of the above exception, another exception occurred:\n",
"\u001b[0;31mTypeError\u001b[0m Traceback (most recent call last)",
"\u001b[0;32m<ipython-input-25-1fe517d36aa7>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0mds_zos_ipsl_abrupt_t\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0msel\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mtime\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mslice\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m\"2150\"\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\"2151\"\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/core/dataset.py\u001b[0m in \u001b[0;36msel\u001b[0;34m(self, indexers, method, tolerance, drop, **indexers_kwargs)\u001b[0m\n\u001b[1;32m 2103\u001b[0m \"\"\"\n\u001b[1;32m 2104\u001b[0m \u001b[0mindexers\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0meither_dict_or_kwargs\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mindexers\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mindexers_kwargs\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m\"sel\"\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 2105\u001b[0;31m pos_indexers, new_indexes = remap_label_indexers(\n\u001b[0m\u001b[1;32m 2106\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mindexers\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mindexers\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mmethod\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mmethod\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mtolerance\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mtolerance\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 2107\u001b[0m )\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/core/coordinates.py\u001b[0m in \u001b[0;36mremap_label_indexers\u001b[0;34m(obj, indexers, method, tolerance, **indexers_kwargs)\u001b[0m\n\u001b[1;32m 395\u001b[0m }\n\u001b[1;32m 396\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 397\u001b[0;31m pos_indexers, new_indexes = indexing.remap_label_indexers(\n\u001b[0m\u001b[1;32m 398\u001b[0m \u001b[0mobj\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mv_indexers\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mmethod\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mmethod\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mtolerance\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mtolerance\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 399\u001b[0m )\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/core/indexing.py\u001b[0m in \u001b[0;36mremap_label_indexers\u001b[0;34m(data_obj, indexers, method, tolerance)\u001b[0m\n\u001b[1;32m 273\u001b[0m \u001b[0mcoords_dtype\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mdata_obj\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mcoords\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0mdim\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mdtype\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 274\u001b[0m \u001b[0mlabel\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mmaybe_cast_to_coords_dtype\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mcoords_dtype\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m--> 275\u001b[0;31m \u001b[0midxr\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mnew_idx\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mconvert_label_indexer\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mindex\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mlabel\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mdim\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mmethod\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mtolerance\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 276\u001b[0m \u001b[0mpos_indexers\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0mdim\u001b[0m\u001b[0;34m]\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0midxr\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 277\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mnew_idx\u001b[0m \u001b[0;32mis\u001b[0m \u001b[0;32mnot\u001b[0m \u001b[0;32mNone\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/core/indexing.py\u001b[0m in \u001b[0;36mconvert_label_indexer\u001b[0;34m(index, label, index_name, method, tolerance)\u001b[0m\n\u001b[1;32m 124\u001b[0m \u001b[0;34m\"cannot use ``method`` argument if any indexers are \"\u001b[0m \u001b[0;34m\"slice objects\"\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 125\u001b[0m )\n\u001b[0;32m--> 126\u001b[0;31m indexer = index.slice_indexer(\n\u001b[0m\u001b[1;32m 127\u001b[0m \u001b[0m_sanitize_slice_element\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mstart\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 128\u001b[0m \u001b[0m_sanitize_slice_element\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mstop\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mslice_indexer\u001b[0;34m(self, start, end, step, kind)\u001b[0m\n\u001b[1;32m 4964\u001b[0m \u001b[0mslice\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;36m1\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;36m3\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;32mNone\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 4965\u001b[0m \"\"\"\n\u001b[0;32m-> 4966\u001b[0;31m \u001b[0mstart_slice\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mend_slice\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mslice_locs\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mstart\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mend\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mstep\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mstep\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mkind\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mkind\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 4967\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 4968\u001b[0m \u001b[0;31m# return a slice\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mslice_locs\u001b[0;34m(self, start, end, step, kind)\u001b[0m\n\u001b[1;32m 5167\u001b[0m \u001b[0mstart_slice\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;32mNone\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5168\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mstart\u001b[0m \u001b[0;32mis\u001b[0m \u001b[0;32mnot\u001b[0m \u001b[0;32mNone\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 5169\u001b[0;31m \u001b[0mstart_slice\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mget_slice_bound\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mstart\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m\"left\"\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mkind\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 5170\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mstart_slice\u001b[0m \u001b[0;32mis\u001b[0m \u001b[0;32mNone\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5171\u001b[0m \u001b[0mstart_slice\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;36m0\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mget_slice_bound\u001b[0;34m(self, label, side, kind)\u001b[0m\n\u001b[1;32m 5084\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mKeyError\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5085\u001b[0m \u001b[0;32mtry\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 5086\u001b[0;31m \u001b[0;32mreturn\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_searchsorted_monotonic\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mside\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 5087\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mValueError\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5088\u001b[0m \u001b[0;31m# raise the original KeyError\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36m_searchsorted_monotonic\u001b[0;34m(self, label, side)\u001b[0m\n\u001b[1;32m 5035\u001b[0m \u001b[0;32mdef\u001b[0m \u001b[0m_searchsorted_monotonic\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mlabel\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mside\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;34m\"left\"\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5036\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mis_monotonic_increasing\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 5037\u001b[0;31m \u001b[0;32mreturn\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0msearchsorted\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mside\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mside\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 5038\u001b[0m \u001b[0;32melif\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mis_monotonic_decreasing\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5039\u001b[0m \u001b[0;31m# np.searchsorted expects ascending sort order, have to reverse\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/base.py\u001b[0m in \u001b[0;36msearchsorted\u001b[0;34m(self, value, side, sorter)\u001b[0m\n\u001b[1;32m 1499\u001b[0m \u001b[0;34m@\u001b[0m\u001b[0mdoc\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0m_shared_docs\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m\"searchsorted\"\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mklass\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;34m\"Index\"\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1500\u001b[0m \u001b[0;32mdef\u001b[0m \u001b[0msearchsorted\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mvalue\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mside\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;34m\"left\"\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0msorter\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;32mNone\u001b[0m\u001b[0;34m)\u001b[0m \u001b[0;34m->\u001b[0m \u001b[0mnp\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mndarray\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 1501\u001b[0;31m \u001b[0;32mreturn\u001b[0m \u001b[0malgorithms\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0msearchsorted\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_values\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mvalue\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mside\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mside\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0msorter\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0msorter\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 1502\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1503\u001b[0m \u001b[0;32mdef\u001b[0m \u001b[0mdrop_duplicates\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mkeep\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;34m\"first\"\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/algorithms.py\u001b[0m in \u001b[0;36msearchsorted\u001b[0;34m(arr, value, side, sorter)\u001b[0m\n\u001b[1;32m 1860\u001b[0m \u001b[0mvalue\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mvalue\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mto_datetime64\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1861\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 1862\u001b[0;31m \u001b[0mresult\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0marr\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0msearchsorted\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mvalue\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mside\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mside\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0msorter\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0msorter\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 1863\u001b[0m \u001b[0;32mreturn\u001b[0m \u001b[0mresult\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1864\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;31mTypeError\u001b[0m: '<' not supported between instances of 'cftime._cftime.DatetimeGregorian' and 'str'"
]
}
],
"source": [
"ds_zos_ipsl_abrupt_t.sel(time=slice(\"2150\",\"2151\"))"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"NOtice discrepancy in the following"
]
},
{
"cell_type": "code",
"execution_count": 73,
"metadata": {},
"outputs": [
{
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".xr-attrs,\n",
".xr-var-attrs,\n",
".xr-var-data {\n",
" grid-column: 1 / -1;\n",
"}\n",
"\n",
"dl.xr-attrs {\n",
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" margin: 0;\n",
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"\n",
".xr-attrs dt, dd {\n",
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"\n",
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"\n",
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"\n",
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"</style><pre class='xr-text-repr-fallback'>&lt;xarray.DataArray &#x27;time&#x27; (time: 10800)&gt;\n",
"array([Timestamp(&#x27;1850-01-16 12:00:00&#x27;), Timestamp(&#x27;1850-02-15 00:00:00&#x27;),\n",
" Timestamp(&#x27;1850-03-16 12:00:00&#x27;), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)\n",
"Coordinates:\n",
" * time (time) object 1850-01-16T12:00:00 ... 2749-12-16 12:00:00\n",
"Attributes:\n",
" axis: T\n",
" standard_name: time\n",
" long_name: Time axis\n",
" bounds: time_bounds</pre><div class='xr-wrap' hidden><div class='xr-header'><div class='xr-obj-type'>xarray.DataArray</div><div class='xr-array-name'>'time'</div><ul class='xr-dim-list'><li><span class='xr-has-index'>time</span>: 10800</li></ul></div><ul class='xr-sections'><li class='xr-section-item'><div class='xr-array-wrap'><input id='section-5ae269fb-6ddf-4177-9665-66e681bd105c' class='xr-array-in' type='checkbox' checked><label for='section-5ae269fb-6ddf-4177-9665-66e681bd105c' title='Show/hide data repr'><svg class='icon xr-icon-database'><use xlink:href='#icon-database'></use></svg></label><div class='xr-array-preview xr-preview'><span>1850-01-16T12:00:00 1850-02-15 ... 2749-12-16 12:00:00</span></div><div class='xr-array-data'><pre>array([Timestamp(&#x27;1850-01-16 12:00:00&#x27;), Timestamp(&#x27;1850-02-15 00:00:00&#x27;),\n",
" Timestamp(&#x27;1850-03-16 12:00:00&#x27;), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)</pre></div></div></li><li class='xr-section-item'><input id='section-49e1886d-c793-4f82-a3e8-524a61c56062' class='xr-section-summary-in' type='checkbox' checked><label for='section-49e1886d-c793-4f82-a3e8-524a61c56062' class='xr-section-summary' >Coordinates: <span>(1)</span></label><div class='xr-section-inline-details'></div><div class='xr-section-details'><ul class='xr-var-list'><li class='xr-var-item'><div class='xr-var-name'><span class='xr-has-index'>time</span></div><div class='xr-var-dims'>(time)</div><div class='xr-var-dtype'>object</div><div class='xr-var-preview xr-preview'>1850-01-16T12:00:00 ... 2749-12-...</div><input id='attrs-b9889a72-fc91-479d-8f69-5dee3c664d73' class='xr-var-attrs-in' type='checkbox' ><label for='attrs-b9889a72-fc91-479d-8f69-5dee3c664d73' title='Show/Hide attributes'><svg class='icon xr-icon-file-text2'><use xlink:href='#icon-file-text2'></use></svg></label><input id='data-fad5e766-8a1e-41ff-beaf-67c8e1ad7fe5' class='xr-var-data-in' type='checkbox'><label for='data-fad5e766-8a1e-41ff-beaf-67c8e1ad7fe5' title='Show/Hide data repr'><svg class='icon xr-icon-database'><use xlink:href='#icon-database'></use></svg></label><div class='xr-var-attrs'><dl class='xr-attrs'><dt><span>axis :</span></dt><dd>T</dd><dt><span>standard_name :</span></dt><dd>time</dd><dt><span>long_name :</span></dt><dd>Time axis</dd><dt><span>bounds :</span></dt><dd>time_bounds</dd></dl></div><div class='xr-var-data'><pre>array([Timestamp(&#x27;1850-01-16 12:00:00&#x27;), Timestamp(&#x27;1850-02-15 00:00:00&#x27;),\n",
" Timestamp(&#x27;1850-03-16 12:00:00&#x27;), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)</pre></div></li></ul></div></li><li class='xr-section-item'><input id='section-766eba46-b9a3-4f79-95ae-5259be584dc7' class='xr-section-summary-in' type='checkbox' checked><label for='section-766eba46-b9a3-4f79-95ae-5259be584dc7' class='xr-section-summary' >Attributes: <span>(4)</span></label><div class='xr-section-inline-details'></div><div class='xr-section-details'><dl class='xr-attrs'><dt><span>axis :</span></dt><dd>T</dd><dt><span>standard_name :</span></dt><dd>time</dd><dt><span>long_name :</span></dt><dd>Time axis</dd><dt><span>bounds :</span></dt><dd>time_bounds</dd></dl></div></li></ul></div></div>"
],
"text/plain": [
"<xarray.DataArray 'time' (time: 10800)>\n",
"array([Timestamp('1850-01-16 12:00:00'), Timestamp('1850-02-15 00:00:00'),\n",
" Timestamp('1850-03-16 12:00:00'), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)\n",
"Coordinates:\n",
" * time (time) object 1850-01-16T12:00:00 ... 2749-12-16 12:00:00\n",
"Attributes:\n",
" axis: T\n",
" standard_name: time\n",
" long_name: Time axis\n",
" bounds: time_bounds"
]
},
"execution_count": 73,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"ds_zos_ipsl_abrupt_t['time']"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"TEST 3 - works directly using xarray/fsspec on one object with open_dataset \n",
"but fails on open_mfdataset \n",
"ds_zos_ipsl_abrupt.sel(time=slice(\"2150\",\"2151\"))"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"import xarray as xr\n",
"import s3fs\n",
"\n",
"fs_s3 = s3fs.S3FileSystem()\n"
]
},
{
"cell_type": "code",
"execution_count": 81,
"metadata": {},
"outputs": [],
"source": [
"#xr.show_versions() #xarray: 0.16.1"
]
},
{
"cell_type": "code",
"execution_count": 75,
"metadata": {},
"outputs": [],
"source": [
"s3path = \"s3://esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_215001-244912.nc\"\n",
"ds = fs_s3.open(s3path, mode='rb')\n",
"xr_ds =xr.open_dataset(ds) #works \n",
"xr_ds.zos.sel(time= slice(\"2150\",\"2151\")) "
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"notice time units uniformity here versus the ones that vary in the cells that fail while using intake"
]
},
{
"cell_type": "code",
"execution_count": 64,
"metadata": {},
"outputs": [
{
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"</style><pre class='xr-text-repr-fallback'>&lt;xarray.DataArray &#x27;time&#x27; (time: 3600)&gt;\n",
"array([cftime.DatetimeGregorian(2150, 1, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2150, 2, 15, 0, 0, 0, 0),\n",
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" cftime.DatetimeGregorian(2449, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2449, 12, 16, 12, 0, 0, 0)], dtype=object)\n",
"Coordinates:\n",
" * time (time) object 2150-01-16 12:00:00 ... 2449-12-16 12:00:00\n",
"Attributes:\n",
" axis: T\n",
" standard_name: time\n",
" long_name: Time axis\n",
" time_origin: 2150-01-01 00:00:00\n",
" bounds: time_bounds</pre><div class='xr-wrap' hidden><div class='xr-header'><div class='xr-obj-type'>xarray.DataArray</div><div class='xr-array-name'>'time'</div><ul class='xr-dim-list'><li><span class='xr-has-index'>time</span>: 3600</li></ul></div><ul class='xr-sections'><li class='xr-section-item'><div class='xr-array-wrap'><input id='section-59594cf8-d2f7-49a7-a854-156b4f6ff086' class='xr-array-in' type='checkbox' checked><label for='section-59594cf8-d2f7-49a7-a854-156b4f6ff086' title='Show/hide data repr'><svg class='icon xr-icon-database'><use xlink:href='#icon-database'></use></svg></label><div class='xr-array-preview xr-preview'><span>2150-01-16 12:00:00 2150-02-15 00:00:00 ... 2449-12-16 12:00:00</span></div><div class='xr-array-data'><pre>array([cftime.DatetimeGregorian(2150, 1, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2150, 2, 15, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2150, 3, 16, 12, 0, 0, 0), ...,\n",
" cftime.DatetimeGregorian(2449, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2449, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2449, 12, 16, 12, 0, 0, 0)], dtype=object)</pre></div></div></li><li class='xr-section-item'><input id='section-0af67b57-b6bd-4c7c-b983-aaaab81bd129' class='xr-section-summary-in' type='checkbox' checked><label for='section-0af67b57-b6bd-4c7c-b983-aaaab81bd129' class='xr-section-summary' >Coordinates: <span>(1)</span></label><div class='xr-section-inline-details'></div><div class='xr-section-details'><ul class='xr-var-list'><li class='xr-var-item'><div class='xr-var-name'><span class='xr-has-index'>time</span></div><div class='xr-var-dims'>(time)</div><div class='xr-var-dtype'>object</div><div class='xr-var-preview xr-preview'>2150-01-16 12:00:00 ... 2449-12-...</div><input id='attrs-439977c5-37ea-461b-8c83-5411ba817454' class='xr-var-attrs-in' type='checkbox' ><label for='attrs-439977c5-37ea-461b-8c83-5411ba817454' title='Show/Hide attributes'><svg class='icon xr-icon-file-text2'><use xlink:href='#icon-file-text2'></use></svg></label><input id='data-c4c0e511-f86f-4120-a8da-d9b5938da900' class='xr-var-data-in' type='checkbox'><label for='data-c4c0e511-f86f-4120-a8da-d9b5938da900' title='Show/Hide data repr'><svg class='icon xr-icon-database'><use xlink:href='#icon-database'></use></svg></label><div class='xr-var-attrs'><dl class='xr-attrs'><dt><span>axis :</span></dt><dd>T</dd><dt><span>standard_name :</span></dt><dd>time</dd><dt><span>long_name :</span></dt><dd>Time axis</dd><dt><span>time_origin :</span></dt><dd>2150-01-01 00:00:00</dd><dt><span>bounds :</span></dt><dd>time_bounds</dd></dl></div><div class='xr-var-data'><pre>array([cftime.DatetimeGregorian(2150, 1, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2150, 2, 15, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2150, 3, 16, 12, 0, 0, 0), ...,\n",
" cftime.DatetimeGregorian(2449, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2449, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2449, 12, 16, 12, 0, 0, 0)], dtype=object)</pre></div></li></ul></div></li><li class='xr-section-item'><input id='section-92141872-a591-4bb6-b089-343f7eabf6be' class='xr-section-summary-in' type='checkbox' checked><label for='section-92141872-a591-4bb6-b089-343f7eabf6be' class='xr-section-summary' >Attributes: <span>(5)</span></label><div class='xr-section-inline-details'></div><div class='xr-section-details'><dl class='xr-attrs'><dt><span>axis :</span></dt><dd>T</dd><dt><span>standard_name :</span></dt><dd>time</dd><dt><span>long_name :</span></dt><dd>Time axis</dd><dt><span>time_origin :</span></dt><dd>2150-01-01 00:00:00</dd><dt><span>bounds :</span></dt><dd>time_bounds</dd></dl></div></li></ul></div></div>"
],
"text/plain": [
"<xarray.DataArray 'time' (time: 3600)>\n",
"array([cftime.DatetimeGregorian(2150, 1, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2150, 2, 15, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2150, 3, 16, 12, 0, 0, 0), ...,\n",
" cftime.DatetimeGregorian(2449, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2449, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2449, 12, 16, 12, 0, 0, 0)], dtype=object)\n",
"Coordinates:\n",
" * time (time) object 2150-01-16 12:00:00 ... 2449-12-16 12:00:00\n",
"Attributes:\n",
" axis: T\n",
" standard_name: time\n",
" long_name: Time axis\n",
" time_origin: 2150-01-01 00:00:00\n",
" bounds: time_bounds"
]
},
"execution_count": 64,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"xr_ds.time "
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": []
},
{
"cell_type": "code",
"execution_count": 86,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"[<File-like object S3FileSystem, esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_185001-214912.nc>]\n",
"s3://esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_215001-244912.nc\n",
"[<File-like object S3FileSystem, esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_185001-214912.nc>]\n",
"s3://esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_245001-274912.nc\n",
"[<File-like object S3FileSystem, esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_185001-214912.nc>, <File-like object S3FileSystem, esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_215001-244912.nc>]\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/coding/times.py:427: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" \n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/coding/times.py:427: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" \n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/numpy/core/_asarray.py:83: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" return array(a, dtype, copy=False, order=order)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/coding/times.py:427: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" \n"
]
}
],
"source": [
"import sys\n",
"dataset = []\n",
"s3path = \"s3://esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_185001-214912.nc\"\n",
"ds = fs_s3.open(s3path, mode='rb')\n",
"dataset.append(ds)\n",
"print(dataset)\n",
"#215001-244912\n",
"#245001-274912\n",
"index1 = 185001\n",
"index2 = 214912\n",
"\n",
"while index1 <= 245001:\n",
" index1 += 30000\n",
" if index1 > 245001:\n",
" break\n",
" index2 += 30000\n",
" s3path = 's3://esgf-world/CMIP6/CMIP/IPSL/IPSL-CM6A-LR/abrupt-4xCO2/r1i1p1f1/Omon/zos/gn/v20190118/zos_Omon_IPSL-CM6A-LR_abrupt-4xCO2_r1i1p1f1_gn_' + str(index1) + '-' + str(index2) + '.nc'\n",
" ds = fs_s3.open(s3path, mode='rb')\n",
" print(s3path)\n",
" print(dataset)\n",
" dataset.append(ds)\n",
" \n",
"ds = xr.open_mfdataset(dataset, chunks={'time': 1}, combine='by_coords')"
]
},
{
"cell_type": "code",
"execution_count": 88,
"metadata": {},
"outputs": [
{
"ename": "TypeError",
"evalue": "'<' not supported between instances of 'cftime._cftime.DatetimeGregorian' and 'str'",
"output_type": "error",
"traceback": [
"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
"\u001b[0;31mKeyError\u001b[0m Traceback (most recent call last)",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mget_loc\u001b[0;34m(self, key, method, tolerance)\u001b[0m\n\u001b[1;32m 2894\u001b[0m \u001b[0;32mtry\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 2895\u001b[0;31m \u001b[0;32mreturn\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_engine\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mget_loc\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mcasted_key\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 2896\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mKeyError\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32mpandas/_libs/index.pyx\u001b[0m in \u001b[0;36mpandas._libs.index.IndexEngine.get_loc\u001b[0;34m()\u001b[0m\n",
"\u001b[0;32mpandas/_libs/index.pyx\u001b[0m in \u001b[0;36mpandas._libs.index.IndexEngine.get_loc\u001b[0;34m()\u001b[0m\n",
"\u001b[0;32mpandas/_libs/hashtable_class_helper.pxi\u001b[0m in \u001b[0;36mpandas._libs.hashtable.PyObjectHashTable.get_item\u001b[0;34m()\u001b[0m\n",
"\u001b[0;32mpandas/_libs/hashtable_class_helper.pxi\u001b[0m in \u001b[0;36mpandas._libs.hashtable.PyObjectHashTable.get_item\u001b[0;34m()\u001b[0m\n",
"\u001b[0;31mKeyError\u001b[0m: '2749'",
"\nThe above exception was the direct cause of the following exception:\n",
"\u001b[0;31mKeyError\u001b[0m Traceback (most recent call last)",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mget_slice_bound\u001b[0;34m(self, label, side, kind)\u001b[0m\n\u001b[1;32m 5082\u001b[0m \u001b[0;32mtry\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 5083\u001b[0;31m \u001b[0mslc\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mget_loc\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 5084\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mKeyError\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mget_loc\u001b[0;34m(self, key, method, tolerance)\u001b[0m\n\u001b[1;32m 2896\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mKeyError\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 2897\u001b[0;31m \u001b[0;32mraise\u001b[0m \u001b[0mKeyError\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mkey\u001b[0m\u001b[0;34m)\u001b[0m \u001b[0;32mfrom\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 2898\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;31mKeyError\u001b[0m: '2749'",
"\nDuring handling of the above exception, another exception occurred:\n",
"\u001b[0;31mTypeError\u001b[0m Traceback (most recent call last)",
"\u001b[0;32m<ipython-input-88-add4b3a8b58e>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0mds\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mzos\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0msel\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mtime\u001b[0m\u001b[0;34m=\u001b[0m \u001b[0mslice\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m\"2749\"\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\"2749\"\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/core/dataarray.py\u001b[0m in \u001b[0;36msel\u001b[0;34m(self, indexers, method, tolerance, drop, **indexers_kwargs)\u001b[0m\n\u001b[1;32m 1141\u001b[0m )\n\u001b[1;32m 1142\u001b[0m \u001b[0;32mreturn\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_from_temp_dataset\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mds\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 1143\u001b[0;31m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 1144\u001b[0m \u001b[0;31m# Much faster algorithm for when all indexers are ints, slices, one-dimensional\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1145\u001b[0m \u001b[0;31m# lists, or zero or one-dimensional np.ndarray's\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/core/dataset.py\u001b[0m in \u001b[0;36msel\u001b[0;34m(self, indexers, method, tolerance, drop, **indexers_kwargs)\u001b[0m\n\u001b[1;32m 2103\u001b[0m \u001b[0mParameters\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 2104\u001b[0m \u001b[0;34m-\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 2105\u001b[0;31m \u001b[0mchunks\u001b[0m \u001b[0;34m:\u001b[0m \u001b[0mint\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m'auto'\u001b[0m \u001b[0;32mor\u001b[0m \u001b[0mmapping\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0moptional\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 2106\u001b[0m \u001b[0mChunk\u001b[0m \u001b[0msizes\u001b[0m \u001b[0malong\u001b[0m \u001b[0meach\u001b[0m \u001b[0mdimension\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0me\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mg\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;31m \u001b[0m\u001b[0;31m`\u001b[0m\u001b[0;31m`\u001b[0m\u001b[0;36m5\u001b[0m\u001b[0;31m`\u001b[0m\u001b[0;31m`\u001b[0m \u001b[0;32mor\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 2107\u001b[0m \u001b[0;31m`\u001b[0m\u001b[0;31m`\u001b[0m\u001b[0;34m{\u001b[0m\u001b[0;34m\"x\"\u001b[0m\u001b[0;34m:\u001b[0m \u001b[0;36m5\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m\"y\"\u001b[0m\u001b[0;34m:\u001b[0m \u001b[0;36m5\u001b[0m\u001b[0;34m}\u001b[0m\u001b[0;31m`\u001b[0m\u001b[0;31m`\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
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"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36mget_slice_bound\u001b[0;34m(self, label, side, kind)\u001b[0m\n\u001b[1;32m 5084\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mKeyError\u001b[0m \u001b[0;32mas\u001b[0m \u001b[0merr\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5085\u001b[0m \u001b[0;32mtry\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 5086\u001b[0;31m \u001b[0;32mreturn\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_searchsorted_monotonic\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mside\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 5087\u001b[0m \u001b[0;32mexcept\u001b[0m \u001b[0mValueError\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5088\u001b[0m \u001b[0;31m# raise the original KeyError\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/indexes/base.py\u001b[0m in \u001b[0;36m_searchsorted_monotonic\u001b[0;34m(self, label, side)\u001b[0m\n\u001b[1;32m 5035\u001b[0m \u001b[0;32mdef\u001b[0m \u001b[0m_searchsorted_monotonic\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mlabel\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mside\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;34m\"left\"\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5036\u001b[0m \u001b[0;32mif\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mis_monotonic_increasing\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 5037\u001b[0;31m \u001b[0;32mreturn\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0msearchsorted\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mlabel\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mside\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mside\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 5038\u001b[0m \u001b[0;32melif\u001b[0m \u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mis_monotonic_decreasing\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5039\u001b[0m \u001b[0;31m# np.searchsorted expects ascending sort order, have to reverse\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/base.py\u001b[0m in \u001b[0;36msearchsorted\u001b[0;34m(self, value, side, sorter)\u001b[0m\n\u001b[1;32m 1499\u001b[0m \u001b[0;34m@\u001b[0m\u001b[0mdoc\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0m_shared_docs\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m\"searchsorted\"\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mklass\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;34m\"Index\"\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1500\u001b[0m \u001b[0;32mdef\u001b[0m \u001b[0msearchsorted\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mvalue\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mside\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;34m\"left\"\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0msorter\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;32mNone\u001b[0m\u001b[0;34m)\u001b[0m \u001b[0;34m->\u001b[0m \u001b[0mnp\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mndarray\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 1501\u001b[0;31m \u001b[0;32mreturn\u001b[0m \u001b[0malgorithms\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0msearchsorted\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0m_values\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mvalue\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mside\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mside\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0msorter\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0msorter\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 1502\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1503\u001b[0m \u001b[0;32mdef\u001b[0m \u001b[0mdrop_duplicates\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mself\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mkeep\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;34m\"first\"\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;32m/srv/conda/envs/notebook/lib/python3.8/site-packages/pandas/core/algorithms.py\u001b[0m in \u001b[0;36msearchsorted\u001b[0;34m(arr, value, side, sorter)\u001b[0m\n\u001b[1;32m 1860\u001b[0m \u001b[0mvalue\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mvalue\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mto_datetime64\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1861\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m-> 1862\u001b[0;31m \u001b[0mresult\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0marr\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0msearchsorted\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mvalue\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mside\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mside\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0msorter\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0msorter\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 1863\u001b[0m \u001b[0;32mreturn\u001b[0m \u001b[0mresult\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 1864\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;31mTypeError\u001b[0m: '<' not supported between instances of 'cftime._cftime.DatetimeGregorian' and 'str'"
]
}
],
"source": [
"ds.zos.sel(time= slice(\"2749\",\"2749\"))"
]
},
{
"cell_type": "code",
"execution_count": 89,
"metadata": {},
"outputs": [
{
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"\n",
"dl.xr-attrs {\n",
" padding: 0;\n",
" margin: 0;\n",
" display: grid;\n",
" grid-template-columns: 125px auto;\n",
"}\n",
"\n",
".xr-attrs dt, dd {\n",
" padding: 0;\n",
" margin: 0;\n",
" float: left;\n",
" padding-right: 10px;\n",
" width: auto;\n",
"}\n",
"\n",
".xr-attrs dt {\n",
" font-weight: normal;\n",
" grid-column: 1;\n",
"}\n",
"\n",
".xr-attrs dt:hover span {\n",
" display: inline-block;\n",
" background: var(--xr-background-color);\n",
" padding-right: 10px;\n",
"}\n",
"\n",
".xr-attrs dd {\n",
" grid-column: 2;\n",
" white-space: pre-wrap;\n",
" word-break: break-all;\n",
"}\n",
"\n",
".xr-icon-database,\n",
".xr-icon-file-text2 {\n",
" display: inline-block;\n",
" vertical-align: middle;\n",
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" stroke: currentColor;\n",
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"}\n",
"</style><pre class='xr-text-repr-fallback'>&lt;xarray.DataArray &#x27;time&#x27; (time: 10800)&gt;\n",
"array([Timestamp(&#x27;1850-01-16 12:00:00&#x27;), Timestamp(&#x27;1850-02-15 00:00:00&#x27;),\n",
" Timestamp(&#x27;1850-03-16 12:00:00&#x27;), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)\n",
"Coordinates:\n",
" * time (time) object 1850-01-16T12:00:00 ... 2749-12-16 12:00:00\n",
"Attributes:\n",
" axis: T\n",
" standard_name: time\n",
" long_name: Time axis\n",
" bounds: time_bounds</pre><div class='xr-wrap' hidden><div class='xr-header'><div class='xr-obj-type'>xarray.DataArray</div><div class='xr-array-name'>'time'</div><ul class='xr-dim-list'><li><span class='xr-has-index'>time</span>: 10800</li></ul></div><ul class='xr-sections'><li class='xr-section-item'><div class='xr-array-wrap'><input id='section-fa1dfa54-b8e5-4026-bc7e-3c5473f642da' class='xr-array-in' type='checkbox' checked><label for='section-fa1dfa54-b8e5-4026-bc7e-3c5473f642da' title='Show/hide data repr'><svg class='icon xr-icon-database'><use xlink:href='#icon-database'></use></svg></label><div class='xr-array-preview xr-preview'><span>1850-01-16T12:00:00 1850-02-15 ... 2749-12-16 12:00:00</span></div><div class='xr-array-data'><pre>array([Timestamp(&#x27;1850-01-16 12:00:00&#x27;), Timestamp(&#x27;1850-02-15 00:00:00&#x27;),\n",
" Timestamp(&#x27;1850-03-16 12:00:00&#x27;), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)</pre></div></div></li><li class='xr-section-item'><input id='section-d9088376-ec1d-4ba6-aba7-894be5b143fe' class='xr-section-summary-in' type='checkbox' checked><label for='section-d9088376-ec1d-4ba6-aba7-894be5b143fe' class='xr-section-summary' >Coordinates: <span>(1)</span></label><div class='xr-section-inline-details'></div><div class='xr-section-details'><ul class='xr-var-list'><li class='xr-var-item'><div class='xr-var-name'><span class='xr-has-index'>time</span></div><div class='xr-var-dims'>(time)</div><div class='xr-var-dtype'>object</div><div class='xr-var-preview xr-preview'>1850-01-16T12:00:00 ... 2749-12-...</div><input id='attrs-a9820732-fa56-4950-a0bc-fee2ab2d39c6' class='xr-var-attrs-in' type='checkbox' ><label for='attrs-a9820732-fa56-4950-a0bc-fee2ab2d39c6' title='Show/Hide attributes'><svg class='icon xr-icon-file-text2'><use xlink:href='#icon-file-text2'></use></svg></label><input id='data-4eed8340-0e09-4a85-bf8c-87b82d2c1f40' class='xr-var-data-in' type='checkbox'><label for='data-4eed8340-0e09-4a85-bf8c-87b82d2c1f40' title='Show/Hide data repr'><svg class='icon xr-icon-database'><use xlink:href='#icon-database'></use></svg></label><div class='xr-var-attrs'><dl class='xr-attrs'><dt><span>axis :</span></dt><dd>T</dd><dt><span>standard_name :</span></dt><dd>time</dd><dt><span>long_name :</span></dt><dd>Time axis</dd><dt><span>bounds :</span></dt><dd>time_bounds</dd></dl></div><div class='xr-var-data'><pre>array([Timestamp(&#x27;1850-01-16 12:00:00&#x27;), Timestamp(&#x27;1850-02-15 00:00:00&#x27;),\n",
" Timestamp(&#x27;1850-03-16 12:00:00&#x27;), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)</pre></div></li></ul></div></li><li class='xr-section-item'><input id='section-94d1c27a-406d-49fd-9ef7-16cc1924ad52' class='xr-section-summary-in' type='checkbox' checked><label for='section-94d1c27a-406d-49fd-9ef7-16cc1924ad52' class='xr-section-summary' >Attributes: <span>(4)</span></label><div class='xr-section-inline-details'></div><div class='xr-section-details'><dl class='xr-attrs'><dt><span>axis :</span></dt><dd>T</dd><dt><span>standard_name :</span></dt><dd>time</dd><dt><span>long_name :</span></dt><dd>Time axis</dd><dt><span>bounds :</span></dt><dd>time_bounds</dd></dl></div></li></ul></div></div>"
],
"text/plain": [
"<xarray.DataArray 'time' (time: 10800)>\n",
"array([Timestamp('1850-01-16 12:00:00'), Timestamp('1850-02-15 00:00:00'),\n",
" Timestamp('1850-03-16 12:00:00'), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)\n",
"Coordinates:\n",
" * time (time) object 1850-01-16T12:00:00 ... 2749-12-16 12:00:00\n",
"Attributes:\n",
" axis: T\n",
" standard_name: time\n",
" long_name: Time axis\n",
" bounds: time_bounds"
]
},
"execution_count": 89,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"ds['time']"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"TESTS repeat to make sure the errors are the same with latest intake esm too"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"%pip install git+https://github.com/intake/intake-esm.git #ensure its latest \n"
]
},
{
"cell_type": "code",
"execution_count": 35,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"\n",
"--> The keys in the returned dictionary of datasets are constructed as follows:\n",
"\t'project.institute.model.experiment_id.mip_table'\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"/srv/conda/envs/notebook/lib/python3.8/site-packages/numpy/core/_asarray.py:83: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" return array(a, dtype, copy=False, order=order)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/coding/times.py:427: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" dtype = _decode_cf_datetime_dtype(data, units, calendar, self.use_cftime)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/coding/times.py:427: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" dtype = _decode_cf_datetime_dtype(data, units, calendar, self.use_cftime)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/numpy/core/_asarray.py:83: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" return array(a, dtype, copy=False, order=order)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/coding/times.py:427: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" dtype = _decode_cf_datetime_dtype(data, units, calendar, self.use_cftime)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/numpy/core/_asarray.py:83: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" return array(a, dtype, copy=False, order=order)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/coding/times.py:427: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" dtype = _decode_cf_datetime_dtype(data, units, calendar, self.use_cftime)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/coding/times.py:427: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" dtype = _decode_cf_datetime_dtype(data, units, calendar, self.use_cftime)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/numpy/core/_asarray.py:83: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" return array(a, dtype, copy=False, order=order)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/coding/times.py:427: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" dtype = _decode_cf_datetime_dtype(data, units, calendar, self.use_cftime)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/xarray/coding/times.py:427: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" dtype = _decode_cf_datetime_dtype(data, units, calendar, self.use_cftime)\n",
"/srv/conda/envs/notebook/lib/python3.8/site-packages/numpy/core/_asarray.py:83: SerializationWarning: Unable to decode time axis into full numpy.datetime64 objects, continuing using cftime.datetime objects instead, reason: dates out of range\n",
" return array(a, dtype, copy=False, order=order)\n"
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"source": [
"import intake, intake_esm\n",
"col = intake.open_esm_datastore(col_url)\n",
"esmcol_data = col.esmcol_data\n",
"\n",
"query_Omon_zos = dict(experiment_id=['abrupt-4xCO2'],#,'historical'],\n",
" mip_table=['Omon'],\n",
" ensemble_member=[\"r1i1p1f1\"],\n",
" model=['IPSL-CM6A-LR'],#,'GFDL-ESM4'],\n",
" grid_label=['gn'],\n",
" variable=[\"zos\"])\n",
"\n",
"cat_Omon_zos = col.search(**query_Omon_zos)\n",
"cat_Omon_zos_lat = latest_version(cat_Omon_zos)\n",
"\n",
"\n",
"cat_Omon_zos_latest = intake.open_esm_datastore(cat_Omon_zos_lat,esmcol_data=esmcol_data)\n",
"\n",
"dset_dict_zos = cat_Omon_zos_latest.to_dataset_dict(cdf_kwargs={'decode_times': True,'chunks': {'time': 1}}, storage_options={'anon':True},\n",
" )"
]
},
{
"cell_type": "code",
"execution_count": 55,
"metadata": {},
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".xr-var-list > li:nth-child(odd) > .xr-var-name span {\n",
" background-color: var(--xr-background-color-row-odd);\n",
"}\n",
"\n",
".xr-var-name {\n",
" grid-column: 1;\n",
"}\n",
"\n",
".xr-var-dims {\n",
" grid-column: 2;\n",
"}\n",
"\n",
".xr-var-dtype {\n",
" grid-column: 3;\n",
" text-align: right;\n",
" color: var(--xr-font-color2);\n",
"}\n",
"\n",
".xr-var-preview {\n",
" grid-column: 4;\n",
"}\n",
"\n",
".xr-var-name,\n",
".xr-var-dims,\n",
".xr-var-dtype,\n",
".xr-preview,\n",
".xr-attrs dt {\n",
" white-space: nowrap;\n",
" overflow: hidden;\n",
" text-overflow: ellipsis;\n",
" padding-right: 10px;\n",
"}\n",
"\n",
".xr-var-name:hover,\n",
".xr-var-dims:hover,\n",
".xr-var-dtype:hover,\n",
".xr-attrs dt:hover {\n",
" overflow: visible;\n",
" width: auto;\n",
" z-index: 1;\n",
"}\n",
"\n",
".xr-var-attrs,\n",
".xr-var-data {\n",
" display: none;\n",
" background-color: var(--xr-background-color) !important;\n",
" padding-bottom: 5px !important;\n",
"}\n",
"\n",
".xr-var-attrs-in:checked ~ .xr-var-attrs,\n",
".xr-var-data-in:checked ~ .xr-var-data {\n",
" display: block;\n",
"}\n",
"\n",
".xr-var-data > table {\n",
" float: right;\n",
"}\n",
"\n",
".xr-var-name span,\n",
".xr-var-data,\n",
".xr-attrs {\n",
" padding-left: 25px !important;\n",
"}\n",
"\n",
".xr-attrs,\n",
".xr-var-attrs,\n",
".xr-var-data {\n",
" grid-column: 1 / -1;\n",
"}\n",
"\n",
"dl.xr-attrs {\n",
" padding: 0;\n",
" margin: 0;\n",
" display: grid;\n",
" grid-template-columns: 125px auto;\n",
"}\n",
"\n",
".xr-attrs dt, dd {\n",
" padding: 0;\n",
" margin: 0;\n",
" float: left;\n",
" padding-right: 10px;\n",
" width: auto;\n",
"}\n",
"\n",
".xr-attrs dt {\n",
" font-weight: normal;\n",
" grid-column: 1;\n",
"}\n",
"\n",
".xr-attrs dt:hover span {\n",
" display: inline-block;\n",
" background: var(--xr-background-color);\n",
" padding-right: 10px;\n",
"}\n",
"\n",
".xr-attrs dd {\n",
" grid-column: 2;\n",
" white-space: pre-wrap;\n",
" word-break: break-all;\n",
"}\n",
"\n",
".xr-icon-database,\n",
".xr-icon-file-text2 {\n",
" display: inline-block;\n",
" vertical-align: middle;\n",
" width: 1em;\n",
" height: 1.5em !important;\n",
" stroke-width: 0;\n",
" stroke: currentColor;\n",
" fill: currentColor;\n",
"}\n",
"</style><pre class='xr-text-repr-fallback'>&lt;xarray.DataArray &#x27;time&#x27; (time: 10800)&gt;\n",
"array([Timestamp(&#x27;1850-01-16 12:00:00&#x27;), Timestamp(&#x27;1850-02-15 00:00:00&#x27;),\n",
" Timestamp(&#x27;1850-03-16 12:00:00&#x27;), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)\n",
"Coordinates:\n",
" * time (time) object 1850-01-16T12:00:00 ... 2749-12-16 12:00:00\n",
"Attributes:\n",
" axis: T\n",
" standard_name: time\n",
" long_name: Time axis\n",
" bounds: time_bounds</pre><div class='xr-wrap' hidden><div class='xr-header'><div class='xr-obj-type'>xarray.DataArray</div><div class='xr-array-name'>'time'</div><ul class='xr-dim-list'><li><span class='xr-has-index'>time</span>: 10800</li></ul></div><ul class='xr-sections'><li class='xr-section-item'><div class='xr-array-wrap'><input id='section-71b77f5e-4de5-411d-bf15-06688460d424' class='xr-array-in' type='checkbox' checked><label for='section-71b77f5e-4de5-411d-bf15-06688460d424' title='Show/hide data repr'><svg class='icon xr-icon-database'><use xlink:href='#icon-database'></use></svg></label><div class='xr-array-preview xr-preview'><span>1850-01-16T12:00:00 1850-02-15 ... 2749-12-16 12:00:00</span></div><div class='xr-array-data'><pre>array([Timestamp(&#x27;1850-01-16 12:00:00&#x27;), Timestamp(&#x27;1850-02-15 00:00:00&#x27;),\n",
" Timestamp(&#x27;1850-03-16 12:00:00&#x27;), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)</pre></div></div></li><li class='xr-section-item'><input id='section-8f9e41f4-30b3-4a4f-99e5-ffb5008152ef' class='xr-section-summary-in' type='checkbox' checked><label for='section-8f9e41f4-30b3-4a4f-99e5-ffb5008152ef' class='xr-section-summary' >Coordinates: <span>(1)</span></label><div class='xr-section-inline-details'></div><div class='xr-section-details'><ul class='xr-var-list'><li class='xr-var-item'><div class='xr-var-name'><span class='xr-has-index'>time</span></div><div class='xr-var-dims'>(time)</div><div class='xr-var-dtype'>object</div><div class='xr-var-preview xr-preview'>1850-01-16T12:00:00 ... 2749-12-...</div><input id='attrs-b176ae47-ef3c-4eb1-a79d-61e26f86ef63' class='xr-var-attrs-in' type='checkbox' ><label for='attrs-b176ae47-ef3c-4eb1-a79d-61e26f86ef63' title='Show/Hide attributes'><svg class='icon xr-icon-file-text2'><use xlink:href='#icon-file-text2'></use></svg></label><input id='data-25e064ff-3059-458f-bce8-dcb38b9e2921' class='xr-var-data-in' type='checkbox'><label for='data-25e064ff-3059-458f-bce8-dcb38b9e2921' title='Show/Hide data repr'><svg class='icon xr-icon-database'><use xlink:href='#icon-database'></use></svg></label><div class='xr-var-attrs'><dl class='xr-attrs'><dt><span>axis :</span></dt><dd>T</dd><dt><span>standard_name :</span></dt><dd>time</dd><dt><span>long_name :</span></dt><dd>Time axis</dd><dt><span>bounds :</span></dt><dd>time_bounds</dd></dl></div><div class='xr-var-data'><pre>array([Timestamp(&#x27;1850-01-16 12:00:00&#x27;), Timestamp(&#x27;1850-02-15 00:00:00&#x27;),\n",
" Timestamp(&#x27;1850-03-16 12:00:00&#x27;), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)</pre></div></li></ul></div></li><li class='xr-section-item'><input id='section-9d627cdd-018b-463e-b9af-d653e15d4966' class='xr-section-summary-in' type='checkbox' checked><label for='section-9d627cdd-018b-463e-b9af-d653e15d4966' class='xr-section-summary' >Attributes: <span>(4)</span></label><div class='xr-section-inline-details'></div><div class='xr-section-details'><dl class='xr-attrs'><dt><span>axis :</span></dt><dd>T</dd><dt><span>standard_name :</span></dt><dd>time</dd><dt><span>long_name :</span></dt><dd>Time axis</dd><dt><span>bounds :</span></dt><dd>time_bounds</dd></dl></div></li></ul></div></div>"
],
"text/plain": [
"<xarray.DataArray 'time' (time: 10800)>\n",
"array([Timestamp('1850-01-16 12:00:00'), Timestamp('1850-02-15 00:00:00'),\n",
" Timestamp('1850-03-16 12:00:00'), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)\n",
"Coordinates:\n",
" * time (time) object 1850-01-16T12:00:00 ... 2749-12-16 12:00:00\n",
"Attributes:\n",
" axis: T\n",
" standard_name: time\n",
" long_name: Time axis\n",
" bounds: time_bounds"
]
},
"execution_count": 55,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"ds_zos_ipsl_abrupt_r = dset_dict_zos[\"CMIP6.IPSL.IPSL-CM6A-LR.abrupt-4xCO2.Omon\"]\n",
"\n",
"ds_zos_ipsl_abrupt_r.time # sel(time=slice(\"2150\",\"2151\"))"
]
},
{
"cell_type": "code",
"execution_count": 58,
"metadata": {},
"outputs": [
{
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"</style><pre class='xr-text-repr-fallback'>&lt;xarray.DataArray &#x27;time&#x27; (time: 10800)&gt;\n",
"array([Timestamp(&#x27;1850-01-16 12:00:00&#x27;), Timestamp(&#x27;1850-02-15 00:00:00&#x27;),\n",
" Timestamp(&#x27;1850-03-16 12:00:00&#x27;), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)\n",
"Coordinates:\n",
" * time (time) object 1850-01-16T12:00:00 ... 2749-12-16 12:00:00\n",
"Attributes:\n",
" axis: T\n",
" standard_name: time\n",
" long_name: Time axis\n",
" bounds: time_bounds</pre><div class='xr-wrap' hidden><div class='xr-header'><div class='xr-obj-type'>xarray.DataArray</div><div class='xr-array-name'>'time'</div><ul class='xr-dim-list'><li><span class='xr-has-index'>time</span>: 10800</li></ul></div><ul class='xr-sections'><li class='xr-section-item'><div class='xr-array-wrap'><input id='section-0bb47410-a91a-4c18-910c-0666e4eadf22' class='xr-array-in' type='checkbox' checked><label for='section-0bb47410-a91a-4c18-910c-0666e4eadf22' title='Show/hide data repr'><svg class='icon xr-icon-database'><use xlink:href='#icon-database'></use></svg></label><div class='xr-array-preview xr-preview'><span>1850-01-16T12:00:00 1850-02-15 ... 2749-12-16 12:00:00</span></div><div class='xr-array-data'><pre>array([Timestamp(&#x27;1850-01-16 12:00:00&#x27;), Timestamp(&#x27;1850-02-15 00:00:00&#x27;),\n",
" Timestamp(&#x27;1850-03-16 12:00:00&#x27;), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)</pre></div></div></li><li class='xr-section-item'><input id='section-6dca02a8-820c-4259-8ddd-3567bbdaea52' class='xr-section-summary-in' type='checkbox' checked><label for='section-6dca02a8-820c-4259-8ddd-3567bbdaea52' class='xr-section-summary' >Coordinates: <span>(1)</span></label><div class='xr-section-inline-details'></div><div class='xr-section-details'><ul class='xr-var-list'><li class='xr-var-item'><div class='xr-var-name'><span class='xr-has-index'>time</span></div><div class='xr-var-dims'>(time)</div><div class='xr-var-dtype'>object</div><div class='xr-var-preview xr-preview'>1850-01-16T12:00:00 ... 2749-12-...</div><input id='attrs-d41d1511-9436-4780-982c-070208266478' class='xr-var-attrs-in' type='checkbox' ><label for='attrs-d41d1511-9436-4780-982c-070208266478' title='Show/Hide attributes'><svg class='icon xr-icon-file-text2'><use xlink:href='#icon-file-text2'></use></svg></label><input id='data-06bd40ad-d8a6-453e-aef4-38b489805b1f' class='xr-var-data-in' type='checkbox'><label for='data-06bd40ad-d8a6-453e-aef4-38b489805b1f' title='Show/Hide data repr'><svg class='icon xr-icon-database'><use xlink:href='#icon-database'></use></svg></label><div class='xr-var-attrs'><dl class='xr-attrs'><dt><span>axis :</span></dt><dd>T</dd><dt><span>standard_name :</span></dt><dd>time</dd><dt><span>long_name :</span></dt><dd>Time axis</dd><dt><span>bounds :</span></dt><dd>time_bounds</dd></dl></div><div class='xr-var-data'><pre>array([Timestamp(&#x27;1850-01-16 12:00:00&#x27;), Timestamp(&#x27;1850-02-15 00:00:00&#x27;),\n",
" Timestamp(&#x27;1850-03-16 12:00:00&#x27;), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)</pre></div></li></ul></div></li><li class='xr-section-item'><input id='section-dc695fd3-2f47-4196-920c-0ca00b554fe5' class='xr-section-summary-in' type='checkbox' checked><label for='section-dc695fd3-2f47-4196-920c-0ca00b554fe5' class='xr-section-summary' >Attributes: <span>(4)</span></label><div class='xr-section-inline-details'></div><div class='xr-section-details'><dl class='xr-attrs'><dt><span>axis :</span></dt><dd>T</dd><dt><span>standard_name :</span></dt><dd>time</dd><dt><span>long_name :</span></dt><dd>Time axis</dd><dt><span>bounds :</span></dt><dd>time_bounds</dd></dl></div></li></ul></div></div>"
],
"text/plain": [
"<xarray.DataArray 'time' (time: 10800)>\n",
"array([Timestamp('1850-01-16 12:00:00'), Timestamp('1850-02-15 00:00:00'),\n",
" Timestamp('1850-03-16 12:00:00'), ...,\n",
" cftime.DatetimeGregorian(2749, 10, 16, 12, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 11, 16, 0, 0, 0, 0),\n",
" cftime.DatetimeGregorian(2749, 12, 16, 12, 0, 0, 0)], dtype=object)\n",
"Coordinates:\n",
" * time (time) object 1850-01-16T12:00:00 ... 2749-12-16 12:00:00\n",
"Attributes:\n",
" axis: T\n",
" standard_name: time\n",
" long_name: Time axis\n",
" bounds: time_bounds"
]
},
"execution_count": 58,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"ds_zos_ipsl_abrupt_r['time']#.sel(time=slice(\"1850\",\"1850\"))"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": []
}
],
"metadata": {
"kernelspec": {
"display_name": "Python [conda env:notebook] *",
"language": "python",
"name": "conda-env-notebook-py"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.8.6"
}
},
"nbformat": 4,
"nbformat_minor": 4
}
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